McDonnell Genome Institute

Washington University

Transcript

lnc-SCIN-3:1

Chromosome

chr7

Gene Name

lnc-SCIN-3

Start

12489759

CPC Label

noncoding

End

12507926

Cancer

BRCA-Luminal B

Strand

+

Peptide

VLPHGVSLIASTAR

Modified Peptide

n[145]VLPHGVSLIASTAR

Peptide Length

14

ORF Length

62

Open Reading Frame (ORF)

LVISSLEIPFERERDKIGVRLFSYIMALVDITYFFQVKLHPARRVLPHGVSLIASTARRKYL

Conservation Score

0.958

PhyloCSF Frame 1

0

No. of Spectra

5

CPC Coding Probability

0.0206638

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9969

PhyloCSF Frame 3

0

CNTI Score

-0.440375912