The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SBDS-4:1

Chromosome

chr7

Gene Name

lnc-SBDS-4

Start

66528437

CPC Label

noncoding

End

66542549

Cancer

OV

Strand

-

Peptide

LVLVLPAAPCK

Modified Peptide

n[145]LVLVLPAAPCK

Peptide Length

11

ORF Length

44

Open Reading Frame (ORF)

LVLVLPAAPCKQAGLSCPSCLLQQALHEEASLVSGSSTSAKCLQ

Conservation Score

0.02

PhyloCSF Frame 1

-4.86

No. of Spectra

13

CPC Coding Probability

0.176468

PhyloCSF Frame 2 

-3.874

CNTI Index

noncoding

Max Probability

0.9953

PhyloCSF Frame 3

-4.118

CNTI Score

-0.344963761