McDonnell Genome Institute
Transcript
lnc-SAMD11-5:1
Chromosome
chr1
Gene Name
lnc-SAMD11-5
Start
901297
CPC Label
noncoding
End
904811
Cancer
OV
Strand
+
Peptide
VGAALFPAGRAR
Modified Peptide
n[145]VGAALFPAGRAR
Peptide Length
12
ORF Length
173
Open Reading Frame (ORF)
LSTPLSEPQQGRCPEGSPGNPAQRPSGHKVGAALFPAGRARVAGEGALEGQPRGRRPLQTLCPAQHPGELPPHAHLTRFLLHSEWRMGGLGRRAGALEWLRGTRMHKGPVQRTARLPGARGPGLPGPAVFIRSEPSTPVGVEPRTQQRVGGWGAASGQVATPWTQAQDARVRA
Conservation Score
0.36
PhyloCSF Frame 1
0
No. of Spectra
3
CPC Coding Probability
0.0567419
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.7413
PhyloCSF Frame 3
0
CNTI Score
-0.265501216