The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-RUNX1T1-1:1

Chromosome

chr8

Gene Name

lnc-RUNX1T1-1

Start

92403544

CPC Label

noncoding

End

92413645

Cancer

OV

Strand

-

Peptide

TLPFEHLAAEAK

Modified Peptide

n[145]TLPFEHLAAEAK

Peptide Length

12

ORF Length

53

Open Reading Frame (ORF)

LIPTSSSSSPRLRENSSAHLAKQTGKDADTRTLPFEHLAAEAKRHGIRELILT

Conservation Score

0.103

PhyloCSF Frame 1

-4.207

No. of Spectra

11

CPC Coding Probability

0.0555952

PhyloCSF Frame 2 

-6.491

CNTI Index

noncoding

Max Probability

0.9898

PhyloCSF Frame 3

-5.539

CNTI Score

-0.386847114