The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-RUNX1-6:1

Chromosome

chr21

Gene Name

lnc-RUNX1-6

Start

36016078

CPC Label

coding

End

36016546

Cancer

BRCA-Luminal A

Strand

-

Peptide

LYDIDMAK

Modified Peptide

n[145]LYDIDM[147]AK

Peptide Length

8

ORF Length

118

Open Reading Frame (ORF)

MIHTSPTFQWPKTLRLWRQPKYPWKSAPRRNKLDHYAIIKFPLTTESAMKKIGDSNTLVFIVDVKANKHQIKQAVKKLYDIDMAKVNTLIRPDGEKKAYVPLAPDYDALDVANKIGII

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

6

CPC Coding Probability

0.735409

PhyloCSF Frame 2 

0

CNTI Index

coding

Max Probability

0.9931

PhyloCSF Frame 3

0

CNTI Score

0.711731565