The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-RPP40-1:9

Chromosome

chr6

Gene Name

lnc-RPP40-1

Start

5029473

CPC Label

noncoding

End

5054154

Cancer

OV

Strand

-

Peptide

LLAHSIPFFFGK

Modified Peptide

n[145]LLAHSIPFFFGK

Peptide Length

12

ORF Length

112

Open Reading Frame (ORF)

MEGVAEPSTQGSRREGGLRIPLTVASFHSPGCARPPHVEVPPQGSMFRAPPPHRFPSHPVARFSSSTPVLLSDAMLHAGLCFWSLRTSLHSSLSHSISKLLAHSIPFFFGKF

Conservation Score

0.027

PhyloCSF Frame 1

0

No. of Spectra

15

CPC Coding Probability

0.236405

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9136

PhyloCSF Frame 3

-4.15

CNTI Score

-0.306751665