McDonnell Genome Institute

Washington University

Transcript

lnc-RPLP0-1:1

Chromosome

chr12

Gene Name

lnc-RPLP0-1

Start

120218063

CPC Label

coding

End

120220117

Cancer

LUAD

Strand

-

Peptide

GSVARPTQGPETPR

Modified Peptide

n[230]GSVARPTQGPETPR

Peptide Length

14

ORF Length

348

Open Reading Frame (ORF)

LHFSLLQTSSSTVALSAPGLSSSAPSSYCSLPPSPPPMPSVFLPPTTIPSPRGQGHTPEFPCTEQSGRGLLPPVAPSWLDLAGLGVMPDTFNSRSPSVEGSLWAVGTESQGRDWRHLPTITSELSGAPRCHTVPCAGSTALQEPGEPQGPPASPSCPEEALAATWEQPWASEVFGPERMPPSGAARSFQEVTEPAVVAVDRQAIFPDTWTLTEEHGLQQERPRPEPGRLGSSSPASVTTEQLGAKMTERGSVARPTQGPETPRSPEGTTEAATQDGKEQPELPCAMAMGTPSTTERISTSGQAGTSSHGCWAWPLAGLSVGRSSLTACSLPLCACLLGQKMLRHCGRT

Conservation Score

1

PhyloCSF Frame 1

5.964

No. of Spectra

4

CPC Coding Probability

0.999969

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

1

PhyloCSF Frame 3

0

CNTI Score

-0.242623532