The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-RPGRIP1-2:1

Chromosome

chr14

Gene Name

lnc-RPGRIP1-2

Start

21200274

CPC Label

noncoding

End

21204355

Cancer

OV

Strand

+

Peptide

RGGQGYGTTNEVLTPKR

Modified Peptide

n[145]RGGQGYGTTNEVLTPKR

Peptide Length

17

ORF Length

59

Open Reading Frame (ORF)

MCSRRELRIAFKLQKRGGQGYGTTNEVLTPKRHLKKEKIDKCTNRRASKRLLSVWDKFK

Conservation Score

0.043

PhyloCSF Frame 1

-5.34

No. of Spectra

2

CPC Coding Probability

0.0383036

PhyloCSF Frame 2 

-4.217

CNTI Index

noncoding

Max Probability

0.5328

PhyloCSF Frame 3

-4.186

CNTI Score

-0.327259227