The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-ROPN1B-7:1

Chromosome

chr3

Gene Name

lnc-ROPN1B-7

Start

125916534

CPC Label

noncoding

End

125924998

Cancer

OV

Strand

+

Peptide

GPQGSRESRGR

Modified Peptide

n[145]GPQGSRESRGR

Peptide Length

11

ORF Length

162

Open Reading Frame (ORF)

LRPRPRHGARGERWDLTLAAEFAAPLSGGARAALLPLAGGRRGERRGPQGSRESRGRRDGSPCRSPRHARHSLEAKLTDSSDSELLRDILQKTVKHPVCVTHPPSVKYARCFLSELIKKHEAVHTEPLDELYEVLVETLMAKESTQGHWSYLLPSGGSVTLS

Conservation Score

1

PhyloCSF Frame 1

8.944

No. of Spectra

1

CPC Coding Probability

0.0126818

PhyloCSF Frame 2 

9.903

CNTI Index

noncoding

Max Probability

0.0662

PhyloCSF Frame 3

8.646

CNTI Score

-0.275051845