McDonnell Genome Institute

Washington University

Transcript

lnc-ROPN1B-20:3

Chromosome

chr3

Gene Name

lnc-ROPN1B-20

Start

125766515

CPC Label

coding

End

125852936

Cancer

EOGC

Strand

+

Peptide

LENTLQDIMQENFPNLAR

Modified Peptide

n[145]LENTLQDIM[147]QENFPNLAR

Peptide Length

18

ORF Length

183

Open Reading Frame (ORF)

LVYLKVMGENGTKLENTLQDIMQENFPNLARQANIQIREIQRMPQRYSLRRATPRHIIVRFTKVKMKEKMLRAAREKGRVTYKGKSIRLTTDLSAEALQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFTDKQMLRDFVTTRPALQELLKEALNMERKNRYSHCKNMPNCKDHRG

Conservation Score

0.499

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.769926

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9114

PhyloCSF Frame 3

0

CNTI Score

-0.275735355