The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-RNFT1-2:1

Chromosome

chr17

Gene Name

lnc-RNFT1-2

Start

60008127

CPC Label

coding

End

60019052

Cancer

CCRC

Strand

-

Peptide

GHVFGTGSLMPGPGMMTLCSSILGPL

Modified Peptide

n[230]GHVFGTGSLM[147]PGPGM[147]MTLCSSILGPL

Peptide Length

26

ORF Length

291

Open Reading Frame (ORF)

MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKSFGSYNNNVDHLGIVHETELPPLTAREVKQIRREISRKSKWVKMLGEWDTYKNSRKLIDRAYQGIPMNIRGPMWSVLLNIEEIKLKNPGRYQIMKEKGKRSSEHIQQMDLDVSGTLRRHIFFRDRYGTKQRELLYILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSLPNTMWHQSASRRRPGVARGHVFGTGSLMPGPGMMTLCSSILGPL

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.999947

PhyloCSF Frame 2 

0

CNTI Index

coding

Max Probability

0.0549

PhyloCSF Frame 3

0

CNTI Score

0.771678017