McDonnell Genome Institute

Washington University

Transcript

lnc-RIPK1-11:4

Chromosome

chr6

Gene Name

lnc-RIPK1-11

Start

3024790

CPC Label

noncoding

End

3027425

Cancer

OSCC

Strand

+

Peptide

ETHVAQCEEAPGILEK

Modified Peptide

n[145]ETHVAQCEEAPGILEK

Peptide Length

16

ORF Length

120

Open Reading Frame (ORF)

LGPATFFLGKQGFVDAERLLWLCSLSQSLSWVEPGKKRKETHVAQCEEAPGILEKFPAAQESGWCLVPGEREISTGLFLSQDGKTEPQKMAIRWGCRKKLANEQFSSGHRVGTSPKPPSL

Conservation Score

0.107

PhyloCSF Frame 1

0

No. of Spectra

3

CPC Coding Probability

0.123483

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.7436

PhyloCSF Frame 3

0

CNTI Score

-0.300644397