The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-RHBDD1-3:13

Chromosome

chr2

Gene Name

lnc-RHBDD1-3

Start

226804035

CPC Label

noncoding

End

226805061

Cancer

HCC

Strand

+

Peptide

HLLFEEQIK

Modified Peptide

HLLFEEQIK

Peptide Length

9

ORF Length

43

Open Reading Frame (ORF)

MISKHLLFEEQIKHEINRWMRLEERREVKTPCHCLILSLQKFY

Conservation Score

0.96

PhyloCSF Frame 1

-5.395

No. of Spectra

6

CPC Coding Probability

0.025412

PhyloCSF Frame 2 

-5.61

CNTI Index

noncoding

Max Probability

0.9302

PhyloCSF Frame 3

-4.854

CNTI Score

-0.429524911