The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-RGS7-10:1

Chromosome

chr1

Gene Name

lnc-RGS7-10

Start

240769419

CPC Label

coding

End

240771534

Cancer

BRCA-HER2-enriched

Strand

-

Peptide

VENEQYENGRK

Modified Peptide

n[145]VENEQYENGRK

Peptide Length

11

ORF Length

182

Open Reading Frame (ORF)

LATKLDIQMKLPGKYCRAYQRNLESQLTSESYYKEILSVPTVEHIIQELKDIIAEQHLQARKCLSLVPSVMGQLKFNTSEEHHADMYRNDLPNPDMLSAELHCWRIKWKWGKTQSFCPPFMKPSICLTSSFFLMCMLNDLLPKVLCISPVMKVENEQYENGRKHLKAYLRNTLTDQRSSNLA

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.920439

PhyloCSF Frame 2 

0

CNTI Index

coding

Max Probability

0.5424

PhyloCSF Frame 3

0

CNTI Score

0.636218474