McDonnell Genome Institute

Washington University

Transcript

lnc-RFLNB-4:1

Chromosome

chr17

Gene Name

lnc-RFLNB-4

Start

314481

CPC Label

coding

End

317352

Cancer

OSCC

Strand

-

Peptide

ITGDGVTGTTGQWR

Modified Peptide

n[145]ITGDGVTGTTGQWR

Peptide Length

14

ORF Length

490

Open Reading Frame (ORF)

LQVNGGGAQALQVNGGGVQGLQVNGGGAQGLKVNGGGAQGLHVSGGGVTGTTGHWRWSTETTGQWRWGTETTGQWRWSTETTGQWRWGHRDYRSMEVGVERLQVNGGGAQRLQVSGGGAQGLQVNGGGAQGLHITGGGVTGTTGQWRWGHRDYRSMEVGAQGLQVNGGGAHGLQVNGGGAQRLQVNGGGAQGLQVNGGGAQALQVNGGGVQGLQVNGSGAQGLQVNGGGAQGLHVSGGGVTGTTGHWRWSTETTGQWRWGTETTGQWRWSTETTGQWRWGHRDYRTMEVGAERLQVNGGGAQRLQVSGGGAQGLQVNGGGAQRLRITGDGVTGTTGQWRWGHRDYRSMEVGHRNYRSVEVEHRDYRSMEVEHRDCRSMEVGAERLQVNGGGAQGLHITGGGVTGTTGQWRWGHRDYRSMEVGHRDYTSVEVGSQGLQVNGGGGTGTTHQWRWSHRDYRSMEVGAQGLQVNGGGGTGTTGQWRWGTGTTGQ

Conservation Score

0.947

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

1

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9768

PhyloCSF Frame 3

0

CNTI Score

-0.294766724