McDonnell Genome Institute

Washington University

Transcript

lnc-RET-3:1

Chromosome

chr10

Gene Name

lnc-RET-3

Start

42948822

CPC Label

noncoding

End

42994705

Cancer

BRCA-Luminal B

Strand

+

Peptide

QHYQESEKTTTEWEK

Modified Peptide

n[145]QHYQESEKTTTEWEK

Peptide Length

15

ORF Length

58

Open Reading Frame (ORF)

LCTKQHYQESEKTTTEWEKTPANHISNNSLISRIYKELLKLENKRTKQPNLKMGRLGM

Conservation Score

0.858

PhyloCSF Frame 1

0

No. of Spectra

15

CPC Coding Probability

0.123118

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9967

PhyloCSF Frame 3

0

CNTI Score

-0.288314519