The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-RBMY1E-2:1

Chromosome

chrY

Gene Name

lnc-RBMY1E-2

Start

21927520

CPC Label

coding

End

21937150

Cancer

CCRC

Strand

-

Peptide

TSAPSAMAR

Modified Peptide

n[230]TSAPSAM[147]AR

Peptide Length

9

ORF Length

318

Open Reading Frame (ORF)

MVEADCHGKLFIGGLNREANEKVLKEVFAKHGPLLEVLLIKGRTSKSRDFVVIIFENAADAKNAARDMNGKSLDGKEIKVEQAKKPSFPSGGRRRPPPSSRNRSPSGSLRSARGSSGGTRPWLPSHEGHLDDGGYALDLNTSSSRGAIPIKRGPSSRSGGPPPKTSAPSAMARSNSWMGGQGPISRGRENYGGPPCREPISSWRNDRMSPRDDGYAIKERNHPLSRESRDYAPLSRDYAYHDYGHSSWDEHFSRGYSDCDGCGEVMLEIILNVQVEVLIEMHFRDRGPLMVHHLQECLCCLMVEAATMIIAINEIDMA

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.999998

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.2

PhyloCSF Frame 3

0

CNTI Score

-0.329107671