McDonnell Genome Institute

Washington University

Transcript

lnc-RBM33-6:2

Chromosome

chr7

Gene Name

lnc-RBM33-6

Start

155962631

CPC Label

coding

End

155966343

Cancer

EOGC

Strand

+

Peptide

AGETLGEGLGQGPLSLAVTAWVNCLAGLAAR

Modified Peptide

n[145]AGETLGEGLGQGPLSLAVTAWVNCLAGLAAR

Peptide Length

31

ORF Length

352

Open Reading Frame (ORF)

LVKEGFLEEVTARLGLKDEWEERGEHVDKARQKGCTAKSQPRRNAGRVLEAACFMLLGSVEGQAGARQLSSLANGATEDSKQDLCSRLHCLWVEPREIDNIRPFRAKTNASFAGCSLTERLLGGLCRGWMSRGHPPEPAWGPGSEAIGPVVSRFSCRLGERGGSRNTEEVKRQSRGDGVPQRRRSTEAEVQACRHVDHEYSARSVGVSSELHQFPGYLGPWITLRSATCQLISKLLLAGLRLSREHLGEPCAAGWTPAHLADYSCFCSPVCPQEVRACLLFLHDHGRRGTNMRVLASPQWWLPRAGETLGEGLGQGPLSLAVTAWVNCLAGLAARAQKAEALPAFSSHPAPM

Conservation Score

0.204

PhyloCSF Frame 1

-3.505

No. of Spectra

2

CPC Coding Probability

0.996455

PhyloCSF Frame 2 

-3.086

CNTI Index

noncoding

Max Probability

0.1027

PhyloCSF Frame 3

-3.751

CNTI Score

-0.336212975