The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-RASGRP1-3:2

Chromosome

chr15

Gene Name

lnc-RASGRP1-3

Start

38139594

CPC Label

coding

End

38226865

Cancer

BRCA-Luminal B

Strand

-

Peptide

SQCDQLEER

Modified Peptide

n[145]SQCDQLEER

Peptide Length

9

ORF Length

95

Open Reading Frame (ORF)

MENDFDELREEGFRRSNYSELQKEIQTKGKEVEKFEKNLDECITRITNTEKCLKELMELKAKARELREEYRSLRSQCDQLEERVSVMEDEMNEMK

Conservation Score

0.34

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.992395

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9981

PhyloCSF Frame 3

0

CNTI Score

-0.287643137