The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-RASA1-14:1

Chromosome

chr5

Gene Name

lnc-RASA1-14

Start

88218890

CPC Label

noncoding

End

88219263

Cancer

BRCA-HER2-enriched

Strand

+

Peptide

GIGAHQVGR

Modified Peptide

n[145]GIGAHQVGR

Peptide Length

9

ORF Length

84

Open Reading Frame (ORF)

MTISDTRGIGAHQVGRSTNLDWGLSEGSRRKTLLKMKLTYYLILLNILRQVFICEWCLHDHNINTEYCSKNMTSLYVEDEMNRN

Conservation Score

0.509

PhyloCSF Frame 1

-4.378

No. of Spectra

8

CPC Coding Probability

0.0690694

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9387

PhyloCSF Frame 3

0

CNTI Score

-0.472984954