The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-RARRES2-5:1

Chromosome

chr7

Gene Name

lnc-RARRES2-5

Start

150404451

CPC Label

noncoding

End

150407486

Cancer

OV

Strand

-

Peptide

LGLLQGPK

Modified Peptide

n[145]LGLLQGPK

Peptide Length

8

ORF Length

161

Open Reading Frame (ORF)

MHCLLPPLPRPPPKLGLLQGPKACLIHSPQPHQGSRLNIPLDLPEGLSSLPASVNLSAEWGLRATSSVFRTLEAGVELTLGKETSPTCKRPHPQVFSTGSCTDICKDRSSKSPWPISARPCDWAASSLSPAIPLTEAPPARRKAPRLSPKFFPPMPHSQPS

Conservation Score

1

PhyloCSF Frame 1

-2.403

No. of Spectra

26

CPC Coding Probability

0.367136

PhyloCSF Frame 2 

0.102

CNTI Index

noncoding

Max Probability

0.828

PhyloCSF Frame 3

-3.248

CNTI Score

-0.327859481