McDonnell Genome Institute
Transcript
lnc-PWP2-1:6
Chromosome
chr21
Gene Name
lnc-PWP2-1
Start
44175454
CPC Label
coding
End
44189556
Cancer
PRAD
Strand
+
Peptide
DAKPQDPPELPSLPMAPSAHPR
Modified Peptide
DAKPQDPPELPSLPM[147]APSAHPR
Peptide Length
22
ORF Length
274
Open Reading Frame (ORF)
LRVPAPLLLLVTHLPLKQPRPHQCLGNPSEAPPCQTPGVGASAPPAASATGPFGESVLPKEASPGDAGAWPSLLSAPSTWYKGHSSQSLSPEDSGGQPETQDPLPPAPGANASLASGRDQHRGCGWGGWCWRQGACWRSFGGGGQPHTLLAMVRQAVAPGAGCFPSSDLGFSSASPCLPRDAKPQDPPELPSLPMAPSAHPRGWTFAGGQAMPASTSGDLCGHLRVLCTVRGAVGTELPAPRGLLCSCSLDLEEPYPHRHARQMRLQTRVMNAA
Conservation Score
0.042
PhyloCSF Frame 1
0
No. of Spectra
2
CPC Coding Probability
1
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.996
PhyloCSF Frame 3
0
CNTI Score
-0.262944042