McDonnell Genome Institute

Washington University

Transcript

lnc-PUM2-2:1

Chromosome

chr2

Gene Name

lnc-PUM2-2

Start

20239891

CPC Label

noncoding

End

20241046

Cancer

BRCA-Luminal A

Strand

-

Peptide

VYIPCIYVK

Modified Peptide

n[145]VYIPCIYVK

Peptide Length

9

ORF Length

48

Open Reading Frame (ORF)

LDAETVKSILAEYKIHNADVTLRSDATADDLIDVVEGNRVYIPCIYVK

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.0805696

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.8524

PhyloCSF Frame 3

0

CNTI Score

-0.307886759