The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-PTS-1:1

Chromosome

chr11

Gene Name

lnc-PTS-1

Start

112270748

CPC Label

noncoding

End

112362534

Cancer

BRCA-Luminal A

Strand

+

Peptide

SLGSIAVEEGLLQLELR

Modified Peptide

n[145]SLGSIAVEEGLLQLELR

Peptide Length

17

ORF Length

48

Open Reading Frame (ORF)

MTYRKLLPQLRLGEQKEGGLSLGFGMQRRSRSLGSIAVEEGLLQLELR

Conservation Score

0.035

PhyloCSF Frame 1

-4.208

No. of Spectra

1

CPC Coding Probability

0.330952

PhyloCSF Frame 2 

-4.512

CNTI Index

noncoding

Max Probability

0.2036

PhyloCSF Frame 3

-5.515

CNTI Score

-0.308899795