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McDonnell Genome Institute
Washington University
Transcript
lnc-PTPRZ1-10:1
Chromosome
chr7
Gene Name
lnc-PTPRZ1-10
Start
122234530
CPC Label
noncoding
End
122234903
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
CIHGVGLR
Modified Peptide
n[145]CIHGVGLR
Peptide Length
8
ORF Length
53
Open Reading Frame (ORF)
MAPAKKGDEKKKGHSAINEVVTREYTINIHKCIHGVGLRSVPLGNSKRFCNLP
Conservation Score
1
PhyloCSF Frame 1
-3.988
No. of Spectra
1
CPC Coding Probability
0.0331999
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9737
PhyloCSF Frame 3
-4.752
CNTI Score
-0.33689263
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