The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-PTPRS-1:1

Chromosome

chr19

Gene Name

lnc-PTPRS-1

Start

5144249

CPC Label

noncoding

End

5144899

Cancer

OV

Strand

-

Peptide

LDTVPTRDALR

Modified Peptide

n[145]LDTVPTRDALR

Peptide Length

11

ORF Length

52

Open Reading Frame (ORF)

LDTVPTRDALRVQVVAVGAIVEVHFVAGLRGGTDDATAVVQPVAVLGDDHLA

Conservation Score

1

PhyloCSF Frame 1

12.331

No. of Spectra

1

CPC Coding Probability

0.0101564

PhyloCSF Frame 2 

9.665

CNTI Index

noncoding

Max Probability

0.4172

PhyloCSF Frame 3

-3.992

CNTI Score

-0.306468368