McDonnell Genome Institute

Washington University

Transcript

lnc-PTPN14-2:6

Chromosome

chr1

Gene Name

lnc-PTPN14-2

Start

214274502

CPC Label

noncoding

End

214281505

Cancer

OV

Strand

-

Peptide

GTGPAAPPSAATLGGRPAR

Modified Peptide

n[145]GTGPAAPPSAATLGGRPAR

Peptide Length

19

ORF Length

182

Open Reading Frame (ORF)

LLLETRHLELRGAGWEPPGGRGGGSPLPGREGGPARASRAPAGRGTGPAAPPSAATLGGRPARAPGRFRCGRDKEPQPLWLLRGGVRRVRLRGVSTERAGRALLLGGREGGHLRGPGIRGPPLDSQPGPKDDQPPVNRRGRSQLRNLTFAVPCKDPRGSDRGTPRRKRQRGNHSREVWCAEG

Conservation Score

1

PhyloCSF Frame 1

0.304

No. of Spectra

1

CPC Coding Probability

0.220826

PhyloCSF Frame 2 

-1.014

CNTI Index

coding

Max Probability

0.5416

PhyloCSF Frame 3

2.835

CNTI Score

0.770990407