The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-PTPN1-5:1

Chromosome

chr20

Gene Name

lnc-PTPN1-5

Start

50479766

CPC Label

noncoding

End

50479991

Cancer

LUAD

Strand

+

Peptide

AGIFQSTK

Modified Peptide

n[230]AGIFQSTK

Peptide Length

8

ORF Length

47

Open Reading Frame (ORF)

MVSLVVAAFYKIAMAEPRKKAYADFYRNYDSIKDFEMRKAGIFQSTK

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

2

CPC Coding Probability

0.110511

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.7991

PhyloCSF Frame 3

0

CNTI Score

-0.392792545