McDonnell Genome Institute
Transcript
lnc-PTP4A3-1:1
Chromosome
chr8
Gene Name
lnc-PTP4A3-1
Start
141374179
CPC Label
noncoding
End
141382226
Cancer
PRAD
Strand
+
Peptide
HFHHPKWETPFLPPSPGNQQSVLISMMCPLWAFCINGIM
Modified Peptide
HFHHPKWETPFLPPSPGNQQSVLISM[147]MCPLWAFCINGIM
Peptide Length
39
ORF Length
108
Open Reading Frame (ORF)
LRNHPATERWSQDLNHSGPWQRRLPGGRPPPCGVSSRQQRPGGFHPSPLYILAVFDIFTGGAPSPLLPKHFHHPKWETPFLPPSPGNQQSVLISMMCPLWAFCINGIM
Conservation Score
0.134
PhyloCSF Frame 1
-4.024
No. of Spectra
1
CPC Coding Probability
0.0423462
PhyloCSF Frame 2
-4.764
CNTI Index
noncoding
Max Probability
0.0581
PhyloCSF Frame 3
-2.697
CNTI Score
-0.35663023