McDonnell Genome Institute

Washington University

Transcript

lnc-PTK6-1:1

Chromosome

chr20

Gene Name

lnc-PTK6-1

Start

63514235

CPC Label

coding

End

63520764

Cancer

OV

Strand

-

Peptide

HLLCAHGR

Modified Peptide

n[145]HLLCAHGR

Peptide Length

8

ORF Length

236

Open Reading Frame (ORF)

MAGQWEAGPSRRAGRIWAGEVSLQSPEAEAGPHCSETPCLGSPERSRQGPGARGTARHANQEGARFPFPGRKASSLSSSPQRRILPTPPSAPQGKSACPYGNPVSLYTRSWLGGVFPVEERVREVRGAEQSEGFGSQPGWICFVALVAGWDGRVPVLFRRSRPTDAVLCPRRVLSEDPQLGRDPGRPLSKTWRDALVPPEHVGKALSWALHRSVCSLHECGKHLLCAHGRAKRRER

Conservation Score

0.153

PhyloCSF Frame 1

2.405

No. of Spectra

1

CPC Coding Probability

0.826519

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.4736

PhyloCSF Frame 3

0

CNTI Score

-0.275677666