The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-PSPC1-4:1

Chromosome

chr13

Gene Name

lnc-PSPC1-4

Start

19458397

CPC Label

coding

End

19458718

Cancer

EOGC

Strand

-

Peptide

GITWGEETLIEYFENPRK

Modified Peptide

n[145]GITWGEETLIEYFENPRK

Peptide Length

18

ORF Length

105

Open Reading Frame (ORF)

MGDVEKGKKIFVQKCAQCHTVEKGGKQKTGPNLHGLFRWKTGQAIGLSYTETDKNKGITWGEETLIEYFENPRKYIPGTKMIFASIKNNAERADLIAYLKKATSE

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.611802

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9828

PhyloCSF Frame 3

0

CNTI Score

-0.380014091