The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-PRSS57-1:1

Chromosome

chr19

Gene Name

lnc-PRSS57-1

Start

676703

CPC Label

coding

End

680240

Cancer

OSCC

Strand

-

Peptide

LPRTRESSQPQLEGLAPDTQHYLSAPGPTR

Modified Peptide

n[145]LPRTRESSQPQLEGLAPDTQHYLSAPGPTR

Peptide Length

30

ORF Length

80

Open Reading Frame (ORF)

MPRLPRTRESSQPQLEGLAPDTQHYLSAPGPTRTVAARTLALPATGCVTLSLSFPIWKTEMKRAPALSGWHRFREGRGRH

Conservation Score

0.998

PhyloCSF Frame 1

-3.142

No. of Spectra

1

CPC Coding Probability

0.520843

PhyloCSF Frame 2 

-3.55

CNTI Index

noncoding

Max Probability

0.3586

PhyloCSF Frame 3

-4.064

CNTI Score

-0.287955061