The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-PRSS27-2:20

Chromosome

chr16

Gene Name

lnc-PRSS27-2

Start

2678205

CPC Label

noncoding

End

2682369

Cancer

BRCA-Luminal A

Strand

-

Peptide

EMGGGGLK

Modified Peptide

n[145]EMGGGGLK

Peptide Length

8

ORF Length

61

Open Reading Frame (ORF)

MDPNYSGEMKNPTKFGWSGLAASQAICNTVGREMGGGGLKSTPAGTTTPYNEKASLAAGLL

Conservation Score

0.088

PhyloCSF Frame 1

-4.595

No. of Spectra

3

CPC Coding Probability

0.180328

PhyloCSF Frame 2 

-3.446

CNTI Index

noncoding

Max Probability

0.9955

PhyloCSF Frame 3

-3.727

CNTI Score

-0.307695309