The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-PRR25-6:1

Chromosome

chr16

Gene Name

lnc-PRR25-6

Start

861073

CPC Label

noncoding

End

874496

Cancer

PRAD

Strand

+

Peptide

GPSAEEMHCVPGGHSGGR

Modified Peptide

GPSAEEM[147]HCVPGGHSGGR

Peptide Length

18

ORF Length

218

Open Reading Frame (ORF)

LLYLPTHERGRVSRCVLTSFSSIAEFSACHPQLRPVQLLWCISRPPSGRLFCYENAVPRRVHGLSAPGGPRLPCFSSSITEPTDDPAGGWERRRGPRGSPRPAQEEELEVMESWAQETEQQVFRGQRRMAPRRKSGIFGCSLLPVSCHGEQVACGDPLPRTRPRSQGPSAEDMPVRGDPPPRTPLRSRGPSAEEMHCVPGGHSGGREPRSLFSVTERR

Conservation Score

0.959

PhyloCSF Frame 1

0

No. of Spectra

2

CPC Coding Probability

0.107656

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.8079

PhyloCSF Frame 3

0

CNTI Score

-0.307572605