McDonnell Genome Institute

Washington University

Transcript

lnc-PROKR2-1:1

Chromosome

chr20

Gene Name

lnc-PROKR2-1

Start

5292387

CPC Label

coding

End

5292831

Cancer

OSCC

Strand

-

Peptide

IYHPNINSNGSIFLDILR

Modified Peptide

n[145]IYHPNINSNGSIFLDILR

Peptide Length

18

ORF Length

147

Open Reading Frame (ORF)

MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPHDRPYQGGVFFWTIRFPTDYPFKPSKVAFTTRIYHPNINSNGSIFLDILRSQWSPALTLSKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.91791

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.7442

PhyloCSF Frame 3

0

CNTI Score

-0.411009064