McDonnell Genome Institute

Washington University

Transcript

lnc-PRODH-1:1

Chromosome

chr22

Gene Name

lnc-PRODH-1

Start

18951933

CPC Label

noncoding

End

18959512

Cancer

OV

Strand

-

Peptide

AAAQASGWAGVR

Modified Peptide

n[145]AAAQASGWAGVR

Peptide Length

12

ORF Length

150

Open Reading Frame (ORF)

LSSRAQSVLGRSCAGILAGPGWCLGGTLGREAGASGGLVLGWVAGEAWRAAAQASGWAGVRRERGEAWPPCRSQARAWVSWGVGQDPGQRQGCLHAGWPHPGLVSAGRSVLRPSAALRRPPLSLQAQPSTCRSGQTLRPQAGRSQEPRRG

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.28627

PhyloCSF Frame 2 

-3.751

CNTI Index

noncoding

Max Probability

0.0525

PhyloCSF Frame 3

0

CNTI Score

-0.297588382