The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-PRKN-19:2

Chromosome

chr6

Gene Name

lnc-PRKN-19

Start

163712875

CPC Label

noncoding

End

163714792

Cancer

PRAD

Strand

-

Peptide

QPDSLKRTGSLWDNLSHSTASPK

Modified Peptide

​

Peptide Length

23

ORF Length

192

Open Reading Frame (ORF)

LRTCPSLPAGLAWDPPVEELGAQGDPRRQPDSLKRTGSLWDNLSHSTASPKRWGHPLLRGRSPQKPEAGGIPWWERHAGLRGDLLKSPGEALSQSWGQDSLEPAPGDHGPGQCVEGRNREVELALDCAWLPAGPQVPLSNPSHATVAKMEQPEPGRPGKHWHFYLSKIQFLTPNSCRPCKKEMRKGVGGPIS

Conservation Score

0.691

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.043459

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.3533

PhyloCSF Frame 3

0

CNTI Score

-0.303851463