The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-PRKCQ-4:1

Chromosome

chr10

Gene Name

lnc-PRKCQ-4

Start

6293099

CPC Label

coding

End

6294684

Cancer

OV

Strand

-

Peptide

FGNQVLQINGENCAGWSSDK

Modified Peptide

n[145]FGNQVLQINGENCAGWSSDK

Peptide Length

20

ORF Length

182

Open Reading Frame (ORF)

LSEASVHISQDGNLYSKLYPELSQHIGLSLNKEETHANMTMVSGAPIQGQLVARPSSTNYTMAPITGNDVGICRAEIKQGIHEAIGSKDQDGKIELWLKSIDNGICVQQVKDNSPTLLVGLRFGNQVLQINGENCAGWSSDKVHKVLKQAFQEKISTSIHDRPFEWTITMHKDSTGHVGFII

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.939624

PhyloCSF Frame 2 

0

CNTI Index

coding

Max Probability

0.982

PhyloCSF Frame 3

0

CNTI Score

0.565174444