McDonnell Genome Institute

Washington University

Transcript

lnc-PRKAB2-5:1

Chromosome

chr1

Gene Name

lnc-PRKAB2-5

Start

147082337

CPC Label

coding

End

147083578

Cancer

BRCA-Luminal B

Strand

-

Peptide

DVNNGNLQLQSK

Modified Peptide

n[145]DVNNGNLQLQSK

Peptide Length

12

ORF Length

242

Open Reading Frame (ORF)

LARSTDTGLLILFKDDYFAKKIILIKKKKEEERKQNKVEAKLRAKQEQEANQKLEEDAEMKSLEEKIGCLLKFSGDLDDQTCREDLHILFSSHGEIKWIDFIRGAKEGIILFKEKDKEALGKAKDVNNGNLQLQSKEVTWEVLEGEVEREALKKITEDQQESLNIWKSKGHRFKGKGKGNKAAHPRSGKEKVQFQGKKMKFANDDEHDENGATGPMKRSGEETDKEEPVSKQQKRENGAGDE

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

4

CPC Coding Probability

0.996042

PhyloCSF Frame 2 

0

CNTI Index

coding

Max Probability

0.7279

PhyloCSF Frame 3

0

CNTI Score

0.671143566