McDonnell Genome Institute

Washington University

Transcript

lnc-PRELID1-2:1

Chromosome

chr5

Gene Name

lnc-PRELID1-2

Start

177264765

CPC Label

noncoding

End

177265241

Cancer

EOGC

Strand

+

Peptide

HGVVPLAAYMRIYKK

Modified Peptide

n[145]HGVVPLAAYM[147]RIYKK

Peptide Length

15

ORF Length

91

Open Reading Frame (ORF)

MTNTKGKRRGTQYMFCRPFRKHGVVPLAAYMRIYKKGDIVDIKGMGTLQKGMPHKCYHGKTGRVYSVTQHAVGIVVNKQGQDSCQEISCAY

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.276469

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.7738

PhyloCSF Frame 3

0

CNTI Score

-0.366504563