The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-PRDM13-9:1

Chromosome

chr6

Gene Name

lnc-PRDM13-9

Start

100177208

CPC Label

coding

End

100178192

Cancer

OV

Strand

+

Peptide

EGGHIAHGQIFSFPSQVR

Modified Peptide

n[145]EGGHIAHGQIFSFPSQVR

Peptide Length

18

ORF Length

116

Open Reading Frame (ORF)

MQQKFDLLIGKRQRSVHLSFDIDVFDCTLAPAAGIPIVGGLTFQEGIYITGEIHSTGLLSALDLVEVNPQLGTLEERAKATASLPVDVTALCLGQTREGGHIAHGQIFSFPSQVRK

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

3

CPC Coding Probability

0.74061

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.926

PhyloCSF Frame 3

0

CNTI Score

-0.353634217