The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-PRAME-7:1

Chromosome

chr22

Gene Name

lnc-PRAME-7

Start

22720298

CPC Label

coding

End

22722072

Cancer

PRAD

Strand

-

Peptide

LFMALFTVLLGLER

Modified Peptide

LFM[147]ALFTVLLGLER

Peptide Length

14

ORF Length

34

Open Reading Frame (ORF)

LFMALFTVLLGLEREDDTDSEGVSVSLPHLSVSM

Conservation Score

1

PhyloCSF Frame 1

-2.87

No. of Spectra

29

CPC Coding Probability

0.528979

PhyloCSF Frame 2 

-5.281

CNTI Index

noncoding

Max Probability

0.9771

PhyloCSF Frame 3

-4.844

CNTI Score

-0.334511742