top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-PRAC2-13:1
Chromosome
chr17
Gene Name
lnc-PRAC2-13
Start
48585513
CPC Label
noncoding
End
48586082
Cancer
HCC
Strand
+
Peptide
ALSVSLPPK
Modified Peptide
n[230]ALSVSLPPK
Peptide Length
9
ORF Length
78
Open Reading Frame (ORF)
LAAPGCYSLCLWSRAAAVRTTRALSVSLPPKYRLPDPHLSLGRISFLPPWDPLGFRKQKRKRIREMHAPKDKPAGAPK
Conservation Score
1
PhyloCSF Frame 1
-0.591
No. of Spectra
3
CPC Coding Probability
0.0254485
PhyloCSF Frame 2
1.837
CNTI Index
noncoding
Max Probability
0.8251
PhyloCSF Frame 3
-2.423
CNTI Score
-0.375942637
bottom of page