McDonnell Genome Institute
Transcript
lnc-PPP4R1-18:1
Chromosome
chr18
Gene Name
lnc-PPP4R1-18
Start
9912337
CPC Label
noncoding
End
9914347
Cancer
PRAD
Strand
-
Peptide
ASATHVTASACLR
Modified Peptide
ASATHVTASACLR
Peptide Length
13
ORF Length
184
Open Reading Frame (ORF)
LWADRGPGSARASPWPLRRTPSERQRRAGARPRRRFADWGRGTTAATARPSSRTRPGSRLPSPNACRCVTGSVGHPLGQQLRVPQLTQPHTSRHGHAHLRASATHVTASACLRARPRPGASSACPALQAGLARRGAAAPARSRLAAARSAAQLSRERVWKEAGQRSAGPTRCAAQGWKRSPLSP
Conservation Score
1
PhyloCSF Frame 1
6.53
No. of Spectra
30
CPC Coding Probability
0.0122148
PhyloCSF Frame 2
2.391
CNTI Index
noncoding
Max Probability
0.9978
PhyloCSF Frame 3
6.512
CNTI Score
-0.265247623