McDonnell Genome Institute

Washington University

Transcript

lnc-PPP1R3C-1:1

Chromosome

chr10

Gene Name

lnc-PPP1R3C-1

Start

91666779

CPC Label

noncoding

End

91667782

Cancer

EOGC

Strand

-

Peptide

VDTVTINDPFVDFNYMIHMVQYDSTHGK

Modified Peptide

n[145]VDTVTINDPFVDFNYM[147]IHM[147]VQYDSTHGK

Peptide Length

28

ORF Length

77

Open Reading Frame (ORF)

MVKVKTKVNGFGHVGCLVTRAAFNFGKVDTVTINDPFVDFNYMIHMVQYDSTHGKFHGTIKAENRKLVINGNPITIF

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

44

CPC Coding Probability

0.439588

PhyloCSF Frame 2 

0

CNTI Index

coding

Max Probability

0.9977

PhyloCSF Frame 3

0

CNTI Score

0.683704875