The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-PPP1R26-5:3

Chromosome

chr9

Gene Name

lnc-PPP1R26-5

Start

135456860

CPC Label

noncoding

End

135457869

Cancer

OV

Strand

+

Peptide

SCLRQPGLGAGGGTPGEGK

Modified Peptide

n[145]SCLRQPGLGAGGGTPGEGK

Peptide Length

19

ORF Length

178

Open Reading Frame (ORF)

LDVVFLDGSQHVFQQGKKGPIQETAAALESQCLQWIRTTKEQEGTSLQVGWSTRLHGEGSQRSCLRQPGLGAGGGTPGEGKEEAMVKAFLMGLVTGDEGWVAGRGARVPGRQDRRCPVTTLGTMGLEEKEAKKQLGREEAAQLRPGGVQRLGESQPSDGRPYCNRSRMSATETGKGRE

Conservation Score

0.093

PhyloCSF Frame 1

0

No. of Spectra

24

CPC Coding Probability

0.23339

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.6507

PhyloCSF Frame 3

0

CNTI Score

-0.31811436