McDonnell Genome Institute

Washington University

Transcript

lnc-PPME1-3:1

Chromosome

chr11

Gene Name

lnc-PPME1-3

Start

74354442

CPC Label

coding

End

74355720

Cancer

BRCA-Luminal B

Strand

+

Peptide

DYFEQYGKK

Modified Peptide

n[145]DYFEQYGKK

Peptide Length

9

ORF Length

99

Open Reading Frame (ORF)

MGMLTNCVVMKDPNTKCSRGFGFVTYATVEEVDAAMNAGPHKVDGRVVEPKRAVSRENSQTPGAHLTVKKLFVGSIKEDPEEHHLRDYFEQYGKKMKRL

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

85

CPC Coding Probability

0.99202

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

1

PhyloCSF Frame 3

0

CNTI Score

-0.309751858