The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-PPM1D-7:1

Chromosome

chr17

Gene Name

lnc-PPM1D-7

Start

60851381

CPC Label

noncoding

End

60851745

Cancer

HCC

Strand

+

Peptide

KVSSTEGAAK

Modified Peptide

n[230]KVSSTEGAAK

Peptide Length

10

ORF Length

44

Open Reading Frame (ORF)

MPERKVSSTEGAAKEEAKRRSPRLSAKLAPAKMEAKPKKAAAKH

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

8

CPC Coding Probability

0.0307402

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

1

PhyloCSF Frame 3

0

CNTI Score

-0.363927053