McDonnell Genome Institute

Washington University

Transcript

lnc-PPFIBP1-1:1

Chromosome

chr12

Gene Name

lnc-PPFIBP1-1

Start

27496936

CPC Label

noncoding

End

27498589

Cancer

PRAD

Strand

+

Peptide

FPACLTVSPPIGNLQAFCK

Modified Peptide

FPACLTVSPPIGNLQAFCK

Peptide Length

19

ORF Length

81

Open Reading Frame (ORF)

MCAGHLMLTIIGESMCCLFEFAGYEVLRLNHVGDWGTQFDMHIPHLQDKFPACLTVSPPIGNLQAFCKESKRFDTEEEFKK

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

6

CPC Coding Probability

0.138615

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.7384

PhyloCSF Frame 3

0

CNTI Score

-0.36074121