The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-PPEF1-7:4

Chromosome

chrX

Gene Name

lnc-PPEF1-7

Start

18984193

CPC Label

noncoding

End

19059962

Cancer

OV

Strand

+

Peptide

DVLYGSGQKR

Modified Peptide

n[145]DVLYGSGQKR

Peptide Length

10

ORF Length

139

Open Reading Frame (ORF)

MAGEASQSWWKRKEEQRDVLYGSGQKREPSERGKSLIKTSDLMKLICYHKNSMGETAPVIQLSPTGSLLQHVRIMGAAIQDEIWVGIQPNHIKDALSILHFPSDLSKNDFSLLRARLPLQFLFSLYYLLPVSKISLGSL

Conservation Score

0.987

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.255858

PhyloCSF Frame 2 

0

CNTI Index

coding

Max Probability

0.0559

PhyloCSF Frame 3

0

CNTI Score

0.720407888